Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.28■□□□□ 0.2
Nop53Q8BK35 Gm15165-201ENSMUST00000118140 502 ntBASIC16.28■□□□□ 0.2
Nop53Q8BK35 Gm14722-201ENSMUST00000118943 689 ntBASIC16.28■□□□□ 0.2
Nop53Q8BK35 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop53Q8BK35 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.27■□□□□ 0.2
Nop53Q8BK35 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Nop53Q8BK35 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop53Q8BK35 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nop53Q8BK35 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop53Q8BK35 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop53Q8BK35 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop53Q8BK35 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.26■□□□□ 0.19
Nop53Q8BK35 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nop53Q8BK35 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.26■□□□□ 0.19
Nop53Q8BK35 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Nop53Q8BK35 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms