Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Gm4459-201ENSMUST00000118750 468 ntBASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Gm19164-201ENSMUST00000210667 640 ntBASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf38Q8BI21 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.66□□□□□ -0.06
Rnf38Q8BI21 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Gm15165-201ENSMUST00000118140 502 ntBASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf38Q8BI21 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Carlr-201ENSMUST00000181515 2574 ntBASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms