Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Slc5a7Q8BGY9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Gm12008-201ENSMUST00000117791 755 ntBASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc5a7Q8BGY9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Gm14722-201ENSMUST00000118943 689 ntBASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms