Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.97□□□□□ -0.01
Ubp1Q811S7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.97□□□□□ -0.01
Ubp1Q811S7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.97□□□□□ -0.01
Ubp1Q811S7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ubp1Q811S7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubp1Q811S7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Gm1401-201ENSMUST00000122048 772 ntBASIC14.96□□□□□ -0.01
Ubp1Q811S7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Gm10499-201ENSMUST00000174094 934 ntBASIC14.96□□□□□ -0.01
Ubp1Q811S7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.96□□□□□ -0.01
Ubp1Q811S7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.96□□□□□ -0.01
Ubp1Q811S7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ubp1Q811S7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ubp1Q811S7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Ubp1Q811S7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ubp1Q811S7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ubp1Q811S7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ubp1Q811S7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.95□□□□□ -0.02
Ubp1Q811S7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.95□□□□□ -0.02
Ubp1Q811S7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.95□□□□□ -0.02
Ubp1Q811S7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.95□□□□□ -0.02
Ubp1Q811S7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ubp1Q811S7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubp1Q811S7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubp1Q811S7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubp1Q811S7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ubp1Q811S7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms