Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Gm15483-201ENSMUST00000120338 456 ntBASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Gm12151-201ENSMUST00000121374 290 ntBASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Gm38294-201ENSMUST00000192831 381 ntBASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp6nlQ80XC3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Usp6nlQ80XC3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Usp6nlQ80XC3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp6nlQ80XC3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp6nlQ80XC3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Usp6nlQ80XC3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp6nlQ80XC3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp6nlQ80XC3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Gm29541-201ENSMUST00000191351 678 ntBASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms