Protein–RNA interactions for Protein: Q80U62

Rubcn, Run domain Beclin-1-interacting and cysteine-rich domain-containing protein, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RubcnQ80U62 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RubcnQ80U62 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Gm37917-201ENSMUST00000194711 392 ntBASIC17.33■□□□□ 0.36
RubcnQ80U62 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RubcnQ80U62 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.33■□□□□ 0.36
RubcnQ80U62 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.32■□□□□ 0.36
RubcnQ80U62 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RubcnQ80U62 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RubcnQ80U62 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RubcnQ80U62 AY702102-202ENSMUST00000194651 1173 ntBASIC17.32■□□□□ 0.36
RubcnQ80U62 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.32■□□□□ 0.36
RubcnQ80U62 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RubcnQ80U62 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RubcnQ80U62 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RubcnQ80U62 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RubcnQ80U62 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RubcnQ80U62 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RubcnQ80U62 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RubcnQ80U62 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.32■□□□□ 0.36
RubcnQ80U62 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RubcnQ80U62 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RubcnQ80U62 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.31■□□□□ 0.36
RubcnQ80U62 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.31■□□□□ 0.36
RubcnQ80U62 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.31■□□□□ 0.36
RubcnQ80U62 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.31■□□□□ 0.36
RubcnQ80U62 Gm46209-201ENSMUST00000217912 553 ntBASIC17.31■□□□□ 0.36
RubcnQ80U62 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RubcnQ80U62 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.31■□□□□ 0.36
RubcnQ80U62 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.31■□□□□ 0.36
RubcnQ80U62 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RubcnQ80U62 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Gm11918-201ENSMUST00000121660 179 ntBASIC17.3■□□□□ 0.36
RubcnQ80U62 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.3■□□□□ 0.36
RubcnQ80U62 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.3■□□□□ 0.36
RubcnQ80U62 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RubcnQ80U62 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.29■□□□□ 0.36
RubcnQ80U62 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.29■□□□□ 0.36
RubcnQ80U62 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.29■□□□□ 0.36
RubcnQ80U62 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Gm9522-201ENSMUST00000182394 926 ntBASIC17.29■□□□□ 0.36
RubcnQ80U62 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.29■□□□□ 0.36
RubcnQ80U62 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RubcnQ80U62 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.29■□□□□ 0.36
RubcnQ80U62 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RubcnQ80U62 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms