Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Fgf17-202ENSMUST00000227123 1336 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14□□□□□ -0.17
Pif1Q80SX8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Gm9385-201ENSMUST00000117563 472 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 Gm18889-201ENSMUST00000174284 929 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pif1Q80SX8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Gm43474-201ENSMUST00000196415 774 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14□□□□□ -0.17
Pif1Q80SX8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 AC140397.2-201ENSMUST00000224213 834 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14□□□□□ -0.17
Pif1Q80SX8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pif1Q80SX8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.99□□□□□ -0.17
Pif1Q80SX8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.99□□□□□ -0.17
Pif1Q80SX8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Gm43125-201ENSMUST00000201724 730 ntBASIC13.99□□□□□ -0.17
Pif1Q80SX8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.99□□□□□ -0.17
Pif1Q80SX8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pif1Q80SX8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Rpph1-201ENSMUST00000175096 319 ntBASIC13.98□□□□□ -0.17
Pif1Q80SX8 Gm25948-201ENSMUST00000175334 112 ntBASIC13.98□□□□□ -0.17
Pif1Q80SX8 Gm8318-201ENSMUST00000182954 872 ntBASIC13.98□□□□□ -0.17
Pif1Q80SX8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.98□□□□□ -0.17
Pif1Q80SX8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms