Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ShprhQ7TPQ3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Gm8749-201ENSMUST00000117737 331 ntBASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Gm18018-201ENSMUST00000198273 408 ntBASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Gm15163-201ENSMUST00000120749 1302 ntBASIC21.18■□□□□ 0.98
ShprhQ7TPQ3 Gm5763-201ENSMUST00000155951 1530 ntBASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Trav13-3-201ENSMUST00000117226 336 ntBASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.17■□□□□ 0.98
ShprhQ7TPQ3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ShprhQ7TPQ3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Gm15678-201ENSMUST00000117573 960 ntBASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Gm9726-201ENSMUST00000180321 678 ntBASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ShprhQ7TPQ3 Gm43433-201ENSMUST00000196573 481 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms