Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vma21Q78T54 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm15165-201ENSMUST00000118140 502 ntBASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm27742-201ENSMUST00000184667 60 ntBASIC12.37□□□□□ -0.43
Vma21Q78T54 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.37□□□□□ -0.43
Vma21Q78T54 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vma21Q78T54 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vma21Q78T54 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vma21Q78T54 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.36□□□□□ -0.43
Vma21Q78T54 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Gm6659-201ENSMUST00000174752 547 ntBASIC12.36□□□□□ -0.43
Vma21Q78T54 Gm25745-201ENSMUST00000174945 133 ntBASIC12.36□□□□□ -0.43
Vma21Q78T54 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Vma21Q78T54 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.36□□□□□ -0.43
Vma21Q78T54 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Vma21Q78T54 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vma21Q78T54 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Vma21Q78T54 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vma21Q78T54 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.35□□□□□ -0.43
Vma21Q78T54 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Gm12497-201ENSMUST00000138778 237 ntBASIC12.35□□□□□ -0.43
Vma21Q78T54 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms