Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup98Q6PFD9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup98Q6PFD9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Gm22189-201ENSMUST00000103822 86 ntBASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Gm27631-201ENSMUST00000184163 466 ntBASIC17.66■□□□□ 0.42
Nup98Q6PFD9 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup98Q6PFD9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Gm6222-201ENSMUST00000120787 396 ntBASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Gm15487-201ENSMUST00000122373 465 ntBASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup98Q6PFD9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms