Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Gm38341-201ENSMUST00000195357 515 ntBASIC12.35□□□□□ -0.43
Col7a1Q63870 Gm43947-201ENSMUST00000203019 959 ntBASIC12.35□□□□□ -0.43
Col7a1Q63870 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.34□□□□□ -0.43
Col7a1Q63870 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.34□□□□□ -0.43
Col7a1Q63870 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.34□□□□□ -0.43
Col7a1Q63870 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Gm37986-201ENSMUST00000193285 383 ntBASIC12.34□□□□□ -0.43
Col7a1Q63870 Gm43138-201ENSMUST00000199123 708 ntBASIC12.34□□□□□ -0.43
Col7a1Q63870 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
Col7a1Q63870 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Gm14263-201ENSMUST00000117955 746 ntBASIC12.34□□□□□ -0.43
Col7a1Q63870 Gm6222-201ENSMUST00000120787 396 ntBASIC12.34□□□□□ -0.43
Col7a1Q63870 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Gm40466-201ENSMUST00000212174 422 ntBASIC12.34□□□□□ -0.43
Col7a1Q63870 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col7a1Q63870 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col7a1Q63870 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col7a1Q63870 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col7a1Q63870 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col7a1Q63870 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col7a1Q63870 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.33□□□□□ -0.44
Col7a1Q63870 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.33□□□□□ -0.44
Col7a1Q63870 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
Col7a1Q63870 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.33□□□□□ -0.44
Col7a1Q63870 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.33□□□□□ -0.44
Col7a1Q63870 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col7a1Q63870 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.33□□□□□ -0.44
Col7a1Q63870 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col7a1Q63870 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.33□□□□□ -0.44
Col7a1Q63870 Gm13461-201ENSMUST00000120980 662 ntBASIC12.33□□□□□ -0.44
Col7a1Q63870 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.33□□□□□ -0.44
Col7a1Q63870 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.33□□□□□ -0.44
Col7a1Q63870 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.33□□□□□ -0.44
Col7a1Q63870 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Col7a1Q63870 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col7a1Q63870 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.32□□□□□ -0.44
Col7a1Q63870 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.32□□□□□ -0.44
Col7a1Q63870 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col7a1Q63870 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Col7a1Q63870 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col7a1Q63870 Mir125a-201ENSMUST00000083545 68 ntBASIC12.32□□□□□ -0.44
Col7a1Q63870 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col7a1Q63870 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col7a1Q63870 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.32□□□□□ -0.44
Col7a1Q63870 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col7a1Q63870 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col7a1Q63870 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.32□□□□□ -0.44
Col7a1Q63870 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col7a1Q63870 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col7a1Q63870 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col7a1Q63870 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.32□□□□□ -0.44
Col7a1Q63870 Gm24644-201ENSMUST00000157114 139 ntBASIC12.32□□□□□ -0.44
Col7a1Q63870 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col7a1Q63870 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.32□□□□□ -0.44
Col7a1Q63870 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms