Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm8344-201ENSMUST00000119813 856 ntBASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm8000-201ENSMUST00000188378 592 ntBASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.19□□□□□ -0.62
Foxc1Q61572 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.19□□□□□ -0.62
Foxc1Q61572 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.19□□□□□ -0.62
Foxc1Q61572 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Foxc1Q61572 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.18□□□□□ -0.62
Foxc1Q61572 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm16107-201ENSMUST00000162523 862 ntBASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.18□□□□□ -0.62
Foxc1Q61572 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms