Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Gm8318-201ENSMUST00000182954 872 ntBASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom1Q5SX79 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Gm12008-201ENSMUST00000117791 755 ntBASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.12■□□□□ 0.17
Shroom1Q5SX79 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Gm10576-201ENSMUST00000191927 825 ntBASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Gm44872-201ENSMUST00000207864 420 ntBASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom1Q5SX79 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms