Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf20Q5DTM8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Rnf20Q5DTM8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.08■□□□□ 0.49
Rnf20Q5DTM8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf20Q5DTM8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf20Q5DTM8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf20Q5DTM8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf20Q5DTM8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf20Q5DTM8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Gm5864-201ENSMUST00000202263 970 ntBASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Gm7787-201ENSMUST00000216858 688 ntBASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rnf20Q5DTM8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf20Q5DTM8 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gm13884-201ENSMUST00000118103 829 ntBASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gm10060-201ENSMUST00000212002 111 ntBASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Celf4-206ENSMUST00000224553 1729 ntBASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf20Q5DTM8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms