Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ddx49Q4FZF3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ddx49Q4FZF3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx49Q4FZF3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Mir8102-201ENSMUST00000184148 139 ntBASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx49Q4FZF3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx49Q4FZF3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx49Q4FZF3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms