Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf223Q3UV31 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Gm14701-201ENSMUST00000117156 348 ntBASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Gm16026-204ENSMUST00000162652 683 ntBASIC14.68□□□□□ -0.06
Rnf223Q3UV31 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf223Q3UV31 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Gm18889-201ENSMUST00000174284 929 ntBASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Gm8396-201ENSMUST00000057361 823 ntBASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf223Q3UV31 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.66□□□□□ -0.06
Rnf223Q3UV31 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms