Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Gm27628-201ENSMUST00000184911 107 ntBASIC12.59□□□□□ -0.39
Znf48Q3US17 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.59□□□□□ -0.39
Znf48Q3US17 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.59□□□□□ -0.39
Znf48Q3US17 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.59□□□□□ -0.39
Znf48Q3US17 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.59□□□□□ -0.39
Znf48Q3US17 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Znf48Q3US17 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Znf48Q3US17 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Znf48Q3US17 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.58□□□□□ -0.39
Znf48Q3US17 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.58□□□□□ -0.4
Znf48Q3US17 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Znf48Q3US17 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Znf48Q3US17 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.58□□□□□ -0.4
Znf48Q3US17 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.58□□□□□ -0.4
Znf48Q3US17 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.58□□□□□ -0.4
Znf48Q3US17 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Znf48Q3US17 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Znf48Q3US17 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Znf48Q3US17 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Znf48Q3US17 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.57□□□□□ -0.4
Znf48Q3US17 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.57□□□□□ -0.4
Znf48Q3US17 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.57□□□□□ -0.4
Znf48Q3US17 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Gm13036-201ENSMUST00000117799 748 ntBASIC12.57□□□□□ -0.4
Znf48Q3US17 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.57□□□□□ -0.4
Znf48Q3US17 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.57□□□□□ -0.4
Znf48Q3US17 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Znf48Q3US17 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms