Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Sox4Q06831 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox4Q06831 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sox4Q06831 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sox4Q06831 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.9□□□□□ -0.02
Sox4Q06831 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Mir3113-201ENSMUST00000175478 76 ntBASIC14.9□□□□□ -0.02
Sox4Q06831 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.9□□□□□ -0.02
Sox4Q06831 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.9□□□□□ -0.02
Sox4Q06831 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox4Q06831 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sox4Q06831 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox4Q06831 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox4Q06831 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Gm17968-201ENSMUST00000194902 784 ntBASIC14.89□□□□□ -0.03
Sox4Q06831 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox4Q06831 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Sox4Q06831 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.89□□□□□ -0.03
Sox4Q06831 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Sox4Q06831 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Sox4Q06831 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Sox4Q06831 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox4Q06831 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Sox4Q06831 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sox4Q06831 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox4Q06831 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox4Q06831 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox4Q06831 Gm12008-201ENSMUST00000117791 755 ntBASIC14.88□□□□□ -0.03
Sox4Q06831 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.88□□□□□ -0.03
Sox4Q06831 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox4Q06831 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox4Q06831 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.88□□□□□ -0.03
Sox4Q06831 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sox4Q06831 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sox4Q06831 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.88□□□□□ -0.03
Sox4Q06831 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms