Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 Gm18624-201ENSMUST00000220966 658 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Mir1897-201ENSMUST00000122581 272 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 Gm27920-201ENSMUST00000183953 96 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.03□□□□□ -0.64
Hspg2Q05793 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.03□□□□□ -0.64
Hspg2Q05793 Gm12957-201ENSMUST00000117835 377 ntBASIC11.03□□□□□ -0.64
Hspg2Q05793 Gm13226-201ENSMUST00000117838 404 ntBASIC11.03□□□□□ -0.64
Hspg2Q05793 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.03□□□□□ -0.64
Hspg2Q05793 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.03□□□□□ -0.64
Hspg2Q05793 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hspg2Q05793 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Hspg2Q05793 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.03□□□□□ -0.64
Hspg2Q05793 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.03□□□□□ -0.64
Hspg2Q05793 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hspg2Q05793 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hspg2Q05793 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.02□□□□□ -0.64
Hspg2Q05793 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hspg2Q05793 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hspg2Q05793 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hspg2Q05793 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hspg2Q05793 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hspg2Q05793 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Hspg2Q05793 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.02□□□□□ -0.65
Hspg2Q05793 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.02□□□□□ -0.65
Hspg2Q05793 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Gm12176-201ENSMUST00000121420 875 ntBASIC11.02□□□□□ -0.65
Hspg2Q05793 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hspg2Q05793 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.02□□□□□ -0.65
Hspg2Q05793 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.02□□□□□ -0.65
Hspg2Q05793 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Hspg2Q05793 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hspg2Q05793 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hspg2Q05793 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hspg2Q05793 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
Hspg2Q05793 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.01□□□□□ -0.65
Hspg2Q05793 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hspg2Q05793 Gm20445-201ENSMUST00000061905 565 ntBASIC11.01□□□□□ -0.65
Hspg2Q05793 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hspg2Q05793 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hspg2Q05793 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms