Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm10013-201ENSMUST00000106074 672 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Smn1P97801 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm6433-201ENSMUST00000118634 875 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.03□□□□□ -0.32
Smn1P97801 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.03□□□□□ -0.32
Smn1P97801 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Smn1P97801 Gm8825-201ENSMUST00000182565 998 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm4518-201ENSMUST00000182638 718 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.03□□□□□ -0.32
Smn1P97801 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.03□□□□□ -0.32
Smn1P97801 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Smn1P97801 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smn1P97801 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Smn1P97801 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.02□□□□□ -0.32
Smn1P97801 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smn1P97801 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smn1P97801 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smn1P97801 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smn1P97801 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smn1P97801 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Gm12134-201ENSMUST00000122109 520 ntBASIC13.02□□□□□ -0.33
Smn1P97801 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Gm9013-201ENSMUST00000132939 882 ntBASIC13.02□□□□□ -0.33
Smn1P97801 Gm6345-202ENSMUST00000180900 204 ntBASIC13.02□□□□□ -0.33
Smn1P97801 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.02□□□□□ -0.33
Smn1P97801 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smn1P97801 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Smn1P97801 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.02□□□□□ -0.33
Smn1P97801 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smn1P97801 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smn1P97801 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Smn1P97801 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Smn1P97801 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.01□□□□□ -0.33
Smn1P97801 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.01□□□□□ -0.33
Smn1P97801 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.01□□□□□ -0.33
Smn1P97801 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.01□□□□□ -0.33
Smn1P97801 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.01□□□□□ -0.33
Smn1P97801 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smn1P97801 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smn1P97801 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms