Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.48□□□□□ -0.25
Sf3b6P59708 Gm29518-201ENSMUST00000190858 372 ntBASIC13.48□□□□□ -0.25
Sf3b6P59708 Gm17808-201ENSMUST00000200859 894 ntBASIC13.48□□□□□ -0.25
Sf3b6P59708 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sf3b6P59708 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.48□□□□□ -0.25
Sf3b6P59708 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.48□□□□□ -0.25
Sf3b6P59708 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Sf3b6P59708 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3b6P59708 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sf3b6P59708 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Mir770-201ENSMUST00000103252 94 ntBASIC13.47□□□□□ -0.25
Sf3b6P59708 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Gm11950-201ENSMUST00000121615 838 ntBASIC13.47□□□□□ -0.25
Sf3b6P59708 Gm21362-201ENSMUST00000194272 928 ntBASIC13.47□□□□□ -0.25
Sf3b6P59708 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.47□□□□□ -0.25
Sf3b6P59708 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.47□□□□□ -0.25
Sf3b6P59708 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3b6P59708 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sf3b6P59708 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
Sf3b6P59708 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sf3b6P59708 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.46□□□□□ -0.25
Sf3b6P59708 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Gm45328-201ENSMUST00000210942 917 ntBASIC13.46□□□□□ -0.25
Sf3b6P59708 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Sf3b6P59708 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3b6P59708 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3b6P59708 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Sf3b6P59708 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3b6P59708 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3b6P59708 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sf3b6P59708 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3b6P59708 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3b6P59708 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sf3b6P59708 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms