Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Gm8655-201ENSMUST00000221159 852 ntBASIC14.55□□□□□ -0.08
Cdkn2bP55271 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdkn2bP55271 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Gm15372-201ENSMUST00000120729 834 ntBASIC14.54□□□□□ -0.08
Cdkn2bP55271 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.54□□□□□ -0.08
Cdkn2bP55271 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdkn2bP55271 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.53□□□□□ -0.08
Cdkn2bP55271 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.53□□□□□ -0.08
Cdkn2bP55271 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.53□□□□□ -0.08
Cdkn2bP55271 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.53□□□□□ -0.08
Cdkn2bP55271 Carlr-201ENSMUST00000181515 2574 ntBASIC14.53□□□□□ -0.08
Cdkn2bP55271 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms