Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pdx1P52946 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdx1P52946 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.01□□□□□ -0.01
Pdx1P52946 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pdx1P52946 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Gm44771-201ENSMUST00000206975 626 ntBASIC15.01□□□□□ -0.01
Pdx1P52946 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pdx1P52946 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdx1P52946 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pdx1P52946 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdx1P52946 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pdx1P52946 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Pdx1P52946 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Gm1401-201ENSMUST00000122048 772 ntBASIC15□□□□□ -0.01
Pdx1P52946 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15□□□□□ -0.01
Pdx1P52946 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15□□□□□ -0.01
Pdx1P52946 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Pdx1P52946 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15□□□□□ -0.01
Pdx1P52946 Gm18246-201ENSMUST00000221023 728 ntBASIC15□□□□□ -0.01
Pdx1P52946 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Pdx1P52946 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdx1P52946 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
Pdx1P52946 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.99□□□□□ -0.01
Pdx1P52946 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.99□□□□□ -0.01
Pdx1P52946 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Pdx1P52946 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
Pdx1P52946 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.99□□□□□ -0.01
Pdx1P52946 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.99□□□□□ -0.01
Pdx1P52946 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.99□□□□□ -0.01
Pdx1P52946 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Pdx1P52946 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.99□□□□□ -0.01
Pdx1P52946 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Pdx1P52946 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.99□□□□□ -0.01
Pdx1P52946 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.99□□□□□ -0.01
Pdx1P52946 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
Pdx1P52946 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Pdx1P52946 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pdx1P52946 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Pdx1P52946 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdx1P52946 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
Pdx1P52946 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.98□□□□□ -0.01
Pdx1P52946 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms