Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SqleP52019 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SqleP52019 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SqleP52019 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SqleP52019 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SqleP52019 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
SqleP52019 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SqleP52019 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
SqleP52019 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SqleP52019 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.4■□□□□ 0.22
SqleP52019 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.4■□□□□ 0.22
SqleP52019 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.4■□□□□ 0.22
SqleP52019 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.4■□□□□ 0.22
SqleP52019 Mir1897-201ENSMUST00000122581 272 ntBASIC16.4■□□□□ 0.22
SqleP52019 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.4■□□□□ 0.22
SqleP52019 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.4■□□□□ 0.22
SqleP52019 Gm46209-201ENSMUST00000217912 553 ntBASIC16.4■□□□□ 0.22
SqleP52019 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SqleP52019 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.4■□□□□ 0.22
SqleP52019 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.4■□□□□ 0.22
SqleP52019 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SqleP52019 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.4■□□□□ 0.22
SqleP52019 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SqleP52019 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SqleP52019 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SqleP52019 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SqleP52019 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.39■□□□□ 0.21
SqleP52019 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.39■□□□□ 0.21
SqleP52019 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SqleP52019 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SqleP52019 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SqleP52019 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.38■□□□□ 0.21
SqleP52019 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SqleP52019 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.38■□□□□ 0.21
SqleP52019 Gm3436-201ENSMUST00000179930 840 ntBASIC16.38■□□□□ 0.21
SqleP52019 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.38■□□□□ 0.21
SqleP52019 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.38■□□□□ 0.21
SqleP52019 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.38■□□□□ 0.21
SqleP52019 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SqleP52019 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SqleP52019 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.37■□□□□ 0.21
SqleP52019 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SqleP52019 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SqleP52019 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.37■□□□□ 0.21
SqleP52019 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Gm43703-201ENSMUST00000200523 763 ntBASIC16.37■□□□□ 0.21
SqleP52019 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.37■□□□□ 0.21
SqleP52019 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.37■□□□□ 0.21
SqleP52019 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SqleP52019 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.37■□□□□ 0.21
SqleP52019 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SqleP52019 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SqleP52019 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SqleP52019 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SqleP52019 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SqleP52019 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SqleP52019 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms