Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-2P42580 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-2P42580 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-2P42580 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-2P42580 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.69■□□□□ 0.58
Nkx1-2P42580 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.69■□□□□ 0.58
Nkx1-2P42580 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Gm8344-201ENSMUST00000119813 856 ntBASIC18.69■□□□□ 0.58
Nkx1-2P42580 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.69■□□□□ 0.58
Nkx1-2P42580 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-2P42580 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx1-2P42580 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.68■□□□□ 0.58
Nkx1-2P42580 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx1-2P42580 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-2P42580 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Gm8097-201ENSMUST00000117903 829 ntBASIC18.67■□□□□ 0.58
Nkx1-2P42580 Gm12644-201ENSMUST00000119935 606 ntBASIC18.67■□□□□ 0.58
Nkx1-2P42580 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.67■□□□□ 0.58
Nkx1-2P42580 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Gm23547-201ENSMUST00000158210 271 ntBASIC18.67■□□□□ 0.58
Nkx1-2P42580 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Ank2-226ENSMUST00000189368 339 ntBASIC18.67■□□□□ 0.58
Nkx1-2P42580 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.67■□□□□ 0.58
Nkx1-2P42580 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-2P42580 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx1-2P42580 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-2P42580 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms