Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox6P40645 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Gm15165-201ENSMUST00000118140 502 ntBASIC14.29□□□□□ -0.12
Sox6P40645 Gm15372-201ENSMUST00000120729 834 ntBASIC14.29□□□□□ -0.12
Sox6P40645 Gm12895-201ENSMUST00000122214 226 ntBASIC14.29□□□□□ -0.12
Sox6P40645 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox6P40645 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox6P40645 Mir6404-201ENSMUST00000183699 94 ntBASIC14.29□□□□□ -0.12
Sox6P40645 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox6P40645 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sox6P40645 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.29□□□□□ -0.12
Sox6P40645 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox6P40645 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox6P40645 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox6P40645 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox6P40645 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.28□□□□□ -0.12
Sox6P40645 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox6P40645 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Sox6P40645 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox6P40645 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sox6P40645 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.27□□□□□ -0.12
Sox6P40645 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sox6P40645 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox6P40645 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Sox6P40645 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox6P40645 Gm28033-201ENSMUST00000184224 96 ntBASIC14.27□□□□□ -0.13
Sox6P40645 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.27□□□□□ -0.13
Sox6P40645 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox6P40645 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.27□□□□□ -0.13
Sox6P40645 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox6P40645 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox6P40645 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sox6P40645 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox6P40645 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sox6P40645 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox6P40645 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.26□□□□□ -0.13
Sox6P40645 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox6P40645 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.26□□□□□ -0.13
Sox6P40645 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox6P40645 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms