Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Gm18766-201ENSMUST00000189811 808 ntBASIC17.37■□□□□ 0.37
Vcam1P29533 Gm18049-201ENSMUST00000208909 581 ntBASIC17.37■□□□□ 0.37
Vcam1P29533 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Vcam1P29533 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Vcam1P29533 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vcam1P29533 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vcam1P29533 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vcam1P29533 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.36■□□□□ 0.37
Vcam1P29533 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Gm28630-201ENSMUST00000187806 498 ntBASIC17.36■□□□□ 0.37
Vcam1P29533 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vcam1P29533 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vcam1P29533 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.36■□□□□ 0.37
Vcam1P29533 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vcam1P29533 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Vcam1P29533 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.36■□□□□ 0.37
Vcam1P29533 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcam1P29533 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Vcam1P29533 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vcam1P29533 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vcam1P29533 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vcam1P29533 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.35■□□□□ 0.37
Vcam1P29533 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.35■□□□□ 0.37
Vcam1P29533 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Gm27306-201ENSMUST00000183970 107 ntBASIC17.35■□□□□ 0.37
Vcam1P29533 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.35■□□□□ 0.37
Vcam1P29533 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
Vcam1P29533 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.35■□□□□ 0.37
Vcam1P29533 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.35■□□□□ 0.37
Vcam1P29533 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
Vcam1P29533 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Vcam1P29533 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vcam1P29533 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vcam1P29533 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcam1P29533 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Vcam1P29533 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms