Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccl6P27784 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccl6P27784 Gm11452-201ENSMUST00000122376 690 ntBASIC11.86□□□□□ -0.51
Ccl6P27784 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccl6P27784 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.86□□□□□ -0.51
Ccl6P27784 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.86□□□□□ -0.51
Ccl6P27784 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.86□□□□□ -0.51
Ccl6P27784 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ccl6P27784 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccl6P27784 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccl6P27784 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccl6P27784 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccl6P27784 Gm13418-201ENSMUST00000119097 944 ntBASIC11.85□□□□□ -0.51
Ccl6P27784 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccl6P27784 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccl6P27784 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccl6P27784 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccl6P27784 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ccl6P27784 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.85□□□□□ -0.51
Ccl6P27784 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ccl6P27784 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Ccl6P27784 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.85□□□□□ -0.51
Ccl6P27784 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccl6P27784 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl6P27784 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Ccl6P27784 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccl6P27784 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccl6P27784 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccl6P27784 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccl6P27784 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccl6P27784 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccl6P27784 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.84□□□□□ -0.51
Ccl6P27784 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccl6P27784 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccl6P27784 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccl6P27784 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Ccl6P27784 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccl6P27784 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl6P27784 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccl6P27784 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccl6P27784 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Ccl6P27784 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccl6P27784 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Ccl6P27784 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccl6P27784 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Ccl6P27784 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl6P27784 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccl6P27784 Gm11780-201ENSMUST00000136880 516 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms