Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 AV026068-213ENSMUST00000223675 1171 ntBASIC14.01□□□□□ -0.17
Cd40lgP27548 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40lgP27548 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cd40lgP27548 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14□□□□□ -0.17
Cd40lgP27548 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cd40lgP27548 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cd40lgP27548 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Cd40lgP27548 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14□□□□□ -0.17
Cd40lgP27548 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd40lgP27548 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Cd40lgP27548 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.99□□□□□ -0.17
Cd40lgP27548 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.99□□□□□ -0.17
Cd40lgP27548 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.99□□□□□ -0.17
Cd40lgP27548 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd40lgP27548 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cd40lgP27548 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms