Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.39□□□□□ -0.11
Msx1P13297 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Msx1P13297 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Mir1895-201ENSMUST00000122615 79 ntBASIC14.39□□□□□ -0.11
Msx1P13297 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.39□□□□□ -0.11
Msx1P13297 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Msx1P13297 Gm19164-201ENSMUST00000210667 640 ntBASIC14.39□□□□□ -0.11
Msx1P13297 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.39□□□□□ -0.11
Msx1P13297 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Msx1P13297 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.39□□□□□ -0.11
Msx1P13297 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx1P13297 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Msx1P13297 Asic1-205ENSMUST00000228185 1818 ntBASIC14.38□□□□□ -0.11
Msx1P13297 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.38□□□□□ -0.11
Msx1P13297 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Msx1P13297 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.38□□□□□ -0.11
Msx1P13297 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Msx1P13297 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Msx1P13297 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.38□□□□□ -0.11
Msx1P13297 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Msx1P13297 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Gm13616-201ENSMUST00000120600 222 ntBASIC14.38□□□□□ -0.11
Msx1P13297 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.38□□□□□ -0.11
Msx1P13297 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.38□□□□□ -0.11
Msx1P13297 Gm4899-201ENSMUST00000178708 719 ntBASIC14.38□□□□□ -0.11
Msx1P13297 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx1P13297 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.37□□□□□ -0.11
Msx1P13297 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.37□□□□□ -0.11
Msx1P13297 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Msx1P13297 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Gm8344-201ENSMUST00000119813 856 ntBASIC14.37□□□□□ -0.11
Msx1P13297 AA543401-201ENSMUST00000164248 1269 ntBASIC14.37□□□□□ -0.11
Msx1P13297 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Msx1P13297 Gm27494-201ENSMUST00000184735 189 ntBASIC14.37□□□□□ -0.11
Msx1P13297 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Msx1P13297 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.37□□□□□ -0.11
Msx1P13297 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.37□□□□□ -0.11
Msx1P13297 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Msx1P13297 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.37□□□□□ -0.11
Msx1P13297 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.37□□□□□ -0.11
Msx1P13297 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx1P13297 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx1P13297 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx1P13297 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.36□□□□□ -0.11
Msx1P13297 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms