Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smim1P0C8K7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smim1P0C8K7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smim1P0C8K7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.47□□□□□ -0.73
Smim1P0C8K7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Gm10033-202ENSMUST00000211874 928 ntBASIC10.46□□□□□ -0.73
Smim1P0C8K7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smim1P0C8K7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smim1P0C8K7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Smim1P0C8K7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.45□□□□□ -0.74
Smim1P0C8K7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smim1P0C8K7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms