Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Slc28a2O88627 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc28a2O88627 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Slc28a2O88627 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Slc28a2O88627 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Slc28a2O88627 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Slc28a2O88627 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc28a2O88627 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Gm15165-201ENSMUST00000118140 502 ntBASIC13.52□□□□□ -0.25
Slc28a2O88627 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Gm9172-201ENSMUST00000212092 954 ntBASIC13.52□□□□□ -0.25
Slc28a2O88627 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.52□□□□□ -0.25
Slc28a2O88627 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Gm7367-201ENSMUST00000057611 492 ntBASIC13.52□□□□□ -0.25
Slc28a2O88627 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc28a2O88627 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Slc28a2O88627 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Slc28a2O88627 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.51□□□□□ -0.25
Slc28a2O88627 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Slc28a2O88627 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.51□□□□□ -0.25
Slc28a2O88627 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.51□□□□□ -0.25
Slc28a2O88627 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc28a2O88627 Gm17807-201ENSMUST00000186869 298 ntBASIC13.51□□□□□ -0.25
Slc28a2O88627 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.51□□□□□ -0.25
Slc28a2O88627 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Slc28a2O88627 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc28a2O88627 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc28a2O88627 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms