Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cops3O88543 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cops3O88543 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.63□□□□□ -0.23
Cops3O88543 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cops3O88543 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.63□□□□□ -0.23
Cops3O88543 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.63□□□□□ -0.23
Cops3O88543 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.63□□□□□ -0.23
Cops3O88543 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.63□□□□□ -0.23
Cops3O88543 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.63□□□□□ -0.23
Cops3O88543 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.63□□□□□ -0.23
Cops3O88543 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cops3O88543 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cops3O88543 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops3O88543 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.63□□□□□ -0.23
Cops3O88543 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cops3O88543 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cops3O88543 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cops3O88543 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cops3O88543 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Cops3O88543 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Gm44454-201ENSMUST00000198541 138 ntBASIC13.62□□□□□ -0.23
Cops3O88543 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Gm9172-201ENSMUST00000212092 954 ntBASIC13.62□□□□□ -0.23
Cops3O88543 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cops3O88543 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.62□□□□□ -0.23
Cops3O88543 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cops3O88543 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops3O88543 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cops3O88543 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.61□□□□□ -0.23
Cops3O88543 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cops3O88543 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cops3O88543 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.61□□□□□ -0.23
Cops3O88543 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.61□□□□□ -0.23
Cops3O88543 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Cops3O88543 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops3O88543 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Cops3O88543 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms