Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Vti1bO88384 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.5□□□□□ -0.09
Vti1bO88384 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.5□□□□□ -0.09
Vti1bO88384 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vti1bO88384 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Vti1bO88384 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.49□□□□□ -0.09
Vti1bO88384 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.49□□□□□ -0.09
Vti1bO88384 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.49□□□□□ -0.09
Vti1bO88384 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vti1bO88384 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.49□□□□□ -0.09
Vti1bO88384 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1bO88384 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Vti1bO88384 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Vti1bO88384 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.48□□□□□ -0.09
Vti1bO88384 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Vti1bO88384 Gm25745-201ENSMUST00000174945 133 ntBASIC14.48□□□□□ -0.09
Vti1bO88384 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Vti1bO88384 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.48□□□□□ -0.09
Vti1bO88384 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vti1bO88384 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.48□□□□□ -0.09
Vti1bO88384 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.48□□□□□ -0.09
Vti1bO88384 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1bO88384 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.47□□□□□ -0.09
Vti1bO88384 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.47□□□□□ -0.09
Vti1bO88384 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.47□□□□□ -0.09
Vti1bO88384 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms