Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Slc4a4O88343 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.87■□□□□ 0.45
Slc4a4O88343 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.87■□□□□ 0.45
Slc4a4O88343 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.87■□□□□ 0.45
Slc4a4O88343 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.87■□□□□ 0.45
Slc4a4O88343 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.87■□□□□ 0.45
Slc4a4O88343 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.87■□□□□ 0.45
Slc4a4O88343 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.87■□□□□ 0.45
Slc4a4O88343 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.87■□□□□ 0.45
Slc4a4O88343 Gm10154-201ENSMUST00000084445 354 ntBASIC17.87■□□□□ 0.45
Slc4a4O88343 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc4a4O88343 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Slc4a4O88343 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.86■□□□□ 0.45
Slc4a4O88343 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.86■□□□□ 0.45
Slc4a4O88343 Celf4-206ENSMUST00000224553 1729 ntBASIC17.86■□□□□ 0.45
Slc4a4O88343 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc4a4O88343 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc4a4O88343 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.85■□□□□ 0.45
Slc4a4O88343 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc4a4O88343 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.85■□□□□ 0.45
Slc4a4O88343 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc4a4O88343 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Slc4a4O88343 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms