Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Gm18018-201ENSMUST00000198273 408 ntBASIC15.35■□□□□ 0.05
AlyrefO08583 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AlyrefO08583 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AlyrefO08583 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.34■□□□□ 0.05
AlyrefO08583 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.34■□□□□ 0.05
AlyrefO08583 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.34■□□□□ 0.05
AlyrefO08583 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.34■□□□□ 0.05
AlyrefO08583 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.34■□□□□ 0.05
AlyrefO08583 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
AlyrefO08583 Olfr582-201ENSMUST00000098212 960 ntBASIC15.34■□□□□ 0.05
AlyrefO08583 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AlyrefO08583 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.34■□□□□ 0.05
AlyrefO08583 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AlyrefO08583 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.34■□□□□ 0.05
AlyrefO08583 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AlyrefO08583 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.33■□□□□ 0.05
AlyrefO08583 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AlyrefO08583 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AlyrefO08583 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AlyrefO08583 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AlyrefO08583 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.33■□□□□ 0.04
AlyrefO08583 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.33■□□□□ 0.04
AlyrefO08583 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.33■□□□□ 0.04
AlyrefO08583 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm4518-201ENSMUST00000182638 718 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.33■□□□□ 0.04
AlyrefO08583 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.33■□□□□ 0.04
AlyrefO08583 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
AlyrefO08583 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AlyrefO08583 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.33■□□□□ 0.04
AlyrefO08583 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.32■□□□□ 0.04
AlyrefO08583 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
AlyrefO08583 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.32■□□□□ 0.04
AlyrefO08583 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AlyrefO08583 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms