Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm11893-201ENSMUST00000117829 491 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm8089-201ENSMUST00000122463 968 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm27533-201ENSMUST00000183800 152 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm18348-201ENSMUST00000191227 820 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm29541-201ENSMUST00000191351 678 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm5035-201ENSMUST00000215581 927 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-1G3UXB3 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Gm21489-201ENSMUST00000189668 818 ntBASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Gm44681-201ENSMUST00000208447 842 ntBASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-1G3UXB3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Gm10499-201ENSMUST00000174094 934 ntBASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Gm18717-201ENSMUST00000192744 1241 ntBASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-1G3UXB3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.46■□□□□ 0.39
Nkx1-1G3UXB3 Gm26461-201ENSMUST00000175064 290 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms