Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Gm21854-201ENSMUST00000179901 471 ntBASIC14.28□□□□□ -0.12
Colca2F8VPY8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Colca2F8VPY8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Celf4-206ENSMUST00000224553 1729 ntBASIC14.27□□□□□ -0.12
Colca2F8VPY8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Colca2F8VPY8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.27□□□□□ -0.13
Colca2F8VPY8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.27□□□□□ -0.13
Colca2F8VPY8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Gm45098-201ENSMUST00000207179 657 ntBASIC14.27□□□□□ -0.13
Colca2F8VPY8 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.27□□□□□ -0.13
Colca2F8VPY8 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.27□□□□□ -0.13
Colca2F8VPY8 Gm9229-201ENSMUST00000222777 126 ntBASIC14.27□□□□□ -0.13
Colca2F8VPY8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Gm9899-201ENSMUST00000065519 555 ntBASIC14.27□□□□□ -0.13
Colca2F8VPY8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Colca2F8VPY8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Gm45453-201ENSMUST00000211758 853 ntBASIC14.26□□□□□ -0.13
Colca2F8VPY8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Gm18624-201ENSMUST00000220966 658 ntBASIC14.26□□□□□ -0.13
Colca2F8VPY8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Colca2F8VPY8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Colca2F8VPY8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms