Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gm6736-201ENSMUST00000166583 948 ntBASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gm45612-201ENSMUST00000211320 160 ntBASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb9E9Q5G2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Gm23935-201ENSMUST00000102303 57 ntBASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Gm24270-201ENSMUST00000102326 57 ntBASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Gm24245-201ENSMUST00000157318 57 ntBASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Gm16026-204ENSMUST00000162652 683 ntBASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb9E9Q5G2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb9E9Q5G2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms