Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hfm1D3Z4R1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Gm6944-201ENSMUST00000182449 1006 ntBASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 AC162801.1-201ENSMUST00000220612 198 ntBASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Hfm1D3Z4R1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Gm15806-201ENSMUST00000120696 955 ntBASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Gm6007-201ENSMUST00000208170 823 ntBASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 AC159006.1-201ENSMUST00000226396 258 ntBASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC21.03■□□□□ 0.96
Hfm1D3Z4R1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Gm5035-201ENSMUST00000215581 927 ntBASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Hfm1D3Z4R1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Hfm1D3Z4R1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hfm1D3Z4R1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
Hfm1D3Z4R1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 AY702102-202ENSMUST00000194651 1173 ntBASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 AC238811.3-201ENSMUST00000225422 709 ntBASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Gm8242-201ENSMUST00000193029 1420 ntBASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hfm1D3Z4R1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC21■□□□□ 0.95
Hfm1D3Z4R1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC21■□□□□ 0.95
Hfm1D3Z4R1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms