Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Abhd11os-203ENSMUST00000222613 363 ntBASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Gm42997-202ENSMUST00000200321 985 ntBASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 AC107711.5-202ENSMUST00000226429 702 ntBASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Gm44545-201ENSMUST00000208262 746 ntBASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmcn1D3YXG0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Trav13-3-201ENSMUST00000117226 336 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm13813-201ENSMUST00000120998 787 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm44126-201ENSMUST00000204831 514 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm8598-201ENSMUST00000221184 836 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm10012-201ENSMUST00000078252 192 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm10339-203ENSMUST00000225409 1671 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm43818-201ENSMUST00000200605 466 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 AC133598.1-201ENSMUST00000224327 660 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms