Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.8□□□□□ -0.36
Col6a4A2AX52 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gm8318-201ENSMUST00000182954 872 ntBASIC12.8□□□□□ -0.36
Col6a4A2AX52 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gm24158-201ENSMUST00000175263 71 ntBASIC12.79□□□□□ -0.36
Col6a4A2AX52 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gm10253-201ENSMUST00000194270 940 ntBASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.79□□□□□ -0.36
Col6a4A2AX52 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.79□□□□□ -0.36
Col6a4A2AX52 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.79□□□□□ -0.36
Col6a4A2AX52 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a4A2AX52 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Mir7684-201ENSMUST00000183858 60 ntBASIC12.78□□□□□ -0.36
Col6a4A2AX52 Gm27680-201ENSMUST00000184192 160 ntBASIC12.78□□□□□ -0.36
Col6a4A2AX52 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.78□□□□□ -0.36
Col6a4A2AX52 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.78□□□□□ -0.36
Col6a4A2AX52 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.78□□□□□ -0.36
Col6a4A2AX52 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms