Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-1A0N8R0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-1A0N8R0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Celf4-206ENSMUST00000224553 1729 ntBASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Gm29518-201ENSMUST00000190858 372 ntBASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Gm18622-201ENSMUST00000219361 595 ntBASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav12d-1A0N8R0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav12d-1A0N8R0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms