Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc194A0A140LIT1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Gm12644-201ENSMUST00000119935 606 ntBASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Grk6-207ENSMUST00000225925 2769 ntBASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc194A0A140LIT1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Gm8097-201ENSMUST00000117903 829 ntBASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc194A0A140LIT1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc194A0A140LIT1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc194A0A140LIT1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms