Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5580A0A0N4SVP8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5580A0A0N4SVP8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm5580A0A0N4SVP8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm5580A0A0N4SVP8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms