Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Gm13036-201ENSMUST00000117799 748 ntBASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Mir5126-201ENSMUST00000175513 77 ntBASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-4A0A075B6B4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Gm45167-201ENSMUST00000208007 322 ntBASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms