Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm23547-201ENSMUST00000158210 271 ntBASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-1A0A075B5Z8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Mir3081-201ENSMUST00000175305 84 ntBASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-1A0A075B5Z8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm18622-201ENSMUST00000219361 595 ntBASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms