Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim3O70209 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim3O70209 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim3O70209 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim3O70209 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.39■□□□□ 0.85
Pdlim3O70209 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim3O70209 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.38■□□□□ 0.85
Pdlim3O70209 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.38■□□□□ 0.85
Pdlim3O70209 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pdlim3O70209 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pdlim3O70209 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim3O70209 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim3O70209 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim3O70209 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim3O70209 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.37■□□□□ 0.85
Pdlim3O70209 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim3O70209 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim3O70209 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim3O70209 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim3O70209 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.36■□□□□ 0.85
Pdlim3O70209 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim3O70209 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Pdlim3O70209 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim3O70209 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim3O70209 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim3O70209 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim3O70209 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim3O70209 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim3O70209 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Pdlim3O70209 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.34■□□□□ 0.85
Pdlim3O70209 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim3O70209 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim3O70209 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Pdlim3O70209 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.34■□□□□ 0.85
Pdlim3O70209 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pdlim3O70209 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pdlim3O70209 Gm37136-201ENSMUST00000194368 194 ntBASIC20.33■□□□□ 0.85
Pdlim3O70209 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdlim3O70209 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pdlim3O70209 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pdlim3O70209 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim3O70209 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim3O70209 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim3O70209 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim3O70209 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim3O70209 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim3O70209 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim3O70209 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim3O70209 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.31■□□□□ 0.84
Pdlim3O70209 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim3O70209 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.31■□□□□ 0.84
Pdlim3O70209 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim3O70209 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim3O70209 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Pdlim3O70209 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim3O70209 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim3O70209 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pdlim3O70209 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.29■□□□□ 0.84
Pdlim3O70209 Nkain2-201ENSMUST00000092602 558 ntBASIC20.29■□□□□ 0.84
Pdlim3O70209 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim3O70209 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim3O70209 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim3O70209 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim3O70209 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim3O70209 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim3O70209 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Pdlim3O70209 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Pdlim3O70209 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim3O70209 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim3O70209 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim3O70209 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.26■□□□□ 0.83
Pdlim3O70209 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim3O70209 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim3O70209 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim3O70209 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim3O70209 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim3O70209 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim3O70209 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pdlim3O70209 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pdlim3O70209 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim3O70209 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim3O70209 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pdlim3O70209 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.23■□□□□ 0.83
Pdlim3O70209 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pdlim3O70209 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim3O70209 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim3O70209 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim3O70209 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim3O70209 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim3O70209 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim3O70209 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim3O70209 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.21■□□□□ 0.83
Pdlim3O70209 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Pdlim3O70209 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim3O70209 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim3O70209 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim3O70209 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pdlim3O70209 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim3O70209 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim3O70209 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms