Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cr1Q9Z0D9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Mir770-201ENSMUST00000103252 94 ntBASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.88□□□□□ -0.35
Cx3cr1Q9Z0D9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cr1Q9Z0D9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms