Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Gm25287-201ENSMUST00000103846 110 ntBASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Gm22918-201ENSMUST00000103855 110 ntBASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Gm26308-201ENSMUST00000157768 69 ntBASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Gm18889-201ENSMUST00000174284 929 ntBASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn8aQ9WTU3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
Scn8aQ9WTU3 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.21■□□□□ 0.02
Scn8aQ9WTU3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.21■□□□□ 0.02
Scn8aQ9WTU3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn8aQ9WTU3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn8aQ9WTU3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Gm13464-201ENSMUST00000119418 935 ntBASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Gm8396-201ENSMUST00000057361 823 ntBASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn8aQ9WTU3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Gm13015-201ENSMUST00000118674 204 ntBASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Gm5479-201ENSMUST00000160578 435 ntBASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn8aQ9WTU3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms